Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.14■□□□□ 0.33
RORAP35398 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.14■□□□□ 0.33
RORAP35398 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.14■□□□□ 0.33
RORAP35398 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.14■□□□□ 0.33
RORAP35398 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.14■□□□□ 0.33
RORAP35398 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.14■□□□□ 0.33
RORAP35398 AL031008.1-201ENST00000619963 541 ntBASIC17.14■□□□□ 0.33
RORAP35398 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.14■□□□□ 0.33
RORAP35398 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.14■□□□□ 0.33
RORAP35398 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.14■□□□□ 0.33
RORAP35398 AC126763.1-201ENST00000552015 2118 ntBASIC17.14■□□□□ 0.33
RORAP35398 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.14■□□□□ 0.33
RORAP35398 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RORAP35398 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RORAP35398 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.13■□□□□ 0.33
RORAP35398 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.13■□□□□ 0.33
RORAP35398 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.13■□□□□ 0.33
RORAP35398 AC073592.3-201ENST00000625118 1834 ntBASIC17.13■□□□□ 0.33
RORAP35398 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RORAP35398 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.13■□□□□ 0.33
RORAP35398 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RORAP35398 POM121L3P-201ENST00000419331 1163 ntBASIC17.13■□□□□ 0.33
RORAP35398 AC079781.3-201ENST00000449110 356 ntBASIC17.13■□□□□ 0.33
RORAP35398 KRT16P4-201ENST00000453883 522 ntBASIC17.13■□□□□ 0.33
RORAP35398 MINOS1P3-201ENST00000457048 203 ntBASIC17.13■□□□□ 0.33
RORAP35398 AC068472.1-201ENST00000474589 881 ntBASIC17.13■□□□□ 0.33
RORAP35398 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.13■□□□□ 0.33
RORAP35398 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.13■□□□□ 0.33
RORAP35398 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 BNIP3P18-201ENST00000593976 575 ntBASIC17.13■□□□□ 0.33
RORAP35398 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.13■□□□□ 0.33
RORAP35398 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.13■□□□□ 0.33
RORAP35398 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RORAP35398 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.13■□□□□ 0.33
RORAP35398 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.13■□□□□ 0.33
RORAP35398 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RORAP35398 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.13■□□□□ 0.33
RORAP35398 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RORAP35398 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
RORAP35398 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RORAP35398 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.12■□□□□ 0.33
RORAP35398 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RORAP35398 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RORAP35398 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 NUS1P2-201ENST00000417358 873 ntBASIC17.12■□□□□ 0.33
RORAP35398 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.12■□□□□ 0.33
RORAP35398 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.12■□□□□ 0.33
RORAP35398 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.12■□□□□ 0.33
RORAP35398 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.12■□□□□ 0.33
RORAP35398 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.12■□□□□ 0.33
RORAP35398 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.12■□□□□ 0.33
RORAP35398 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RORAP35398 AC009154.2-201ENST00000621177 724 ntBASIC17.12■□□□□ 0.33
RORAP35398 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RORAP35398 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RORAP35398 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms