Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RFC1P35251 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RFC1P35251 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RFC1P35251 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC1P35251 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
RFC1P35251 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
RFC1P35251 AC005332.8-201ENST00000622750 2735 ntBASIC19.05■□□□□ 0.64
RFC1P35251 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.05■□□□□ 0.64
RFC1P35251 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.05■□□□□ 0.64
RFC1P35251 KRT18P38-201ENST00000449496 1282 ntBASIC19.05■□□□□ 0.64
RFC1P35251 AC092597.1-201ENST00000487352 616 ntBASIC19.05■□□□□ 0.64
RFC1P35251 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 RN7SL850P-201ENST00000579959 291 ntBASIC19.05■□□□□ 0.64
RFC1P35251 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.05■□□□□ 0.64
RFC1P35251 AL136038.4-201ENST00000603606 1261 ntBASIC19.05■□□□□ 0.64
RFC1P35251 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.05■□□□□ 0.64
RFC1P35251 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.05■□□□□ 0.64
RFC1P35251 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.05■□□□□ 0.64
RFC1P35251 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RFC1P35251 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFC1P35251 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.05■□□□□ 0.64
RFC1P35251 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RFC1P35251 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFC1P35251 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RFC1P35251 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.04■□□□□ 0.64
RFC1P35251 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC1P35251 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC1P35251 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.04■□□□□ 0.64
RFC1P35251 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFC1P35251 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFC1P35251 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC1P35251 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC1P35251 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFC1P35251 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.03■□□□□ 0.64
RFC1P35251 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
RFC1P35251 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.03■□□□□ 0.64
RFC1P35251 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC1P35251 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC1P35251 HLA-F-220ENST00000434407 884 ntBASIC19.03■□□□□ 0.64
RFC1P35251 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.03■□□□□ 0.64
RFC1P35251 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RFC1P35251 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC1P35251 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RFC1P35251 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.03■□□□□ 0.64
RFC1P35251 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFC1P35251 AC026471.1-201ENST00000564629 3026 ntBASIC19.03■□□□□ 0.64
RFC1P35251 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFC1P35251 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms