Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 AL161938.1-201ENST00000569833 2180 ntBASIC17.34■□□□□ 0.37
CCKBRP32239 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCKBRP32239 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCKBRP32239 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCKBRP32239 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.34■□□□□ 0.37
CCKBRP32239 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CCKBRP32239 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.33■□□□□ 0.37
CCKBRP32239 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.33■□□□□ 0.37
CCKBRP32239 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCKBRP32239 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCKBRP32239 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.33■□□□□ 0.37
CCKBRP32239 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.33■□□□□ 0.37
CCKBRP32239 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.33■□□□□ 0.37
CCKBRP32239 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCKBRP32239 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCKBRP32239 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CCKBRP32239 AC004408.2-201ENST00000623613 2777 ntBASIC17.33■□□□□ 0.36
CCKBRP32239 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.33■□□□□ 0.36
CCKBRP32239 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCKBRP32239 FGFR3P6-201ENST00000457012 610 ntBASIC17.33■□□□□ 0.36
CCKBRP32239 RNPS1P1-201ENST00000507437 918 ntBASIC17.33■□□□□ 0.36
CCKBRP32239 AC073648.2-201ENST00000510116 352 ntBASIC17.33■□□□□ 0.36
CCKBRP32239 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.33■□□□□ 0.36
CCKBRP32239 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.33■□□□□ 0.36
CCKBRP32239 AC148477.8-201ENST00000624298 468 ntBASIC17.33■□□□□ 0.36
CCKBRP32239 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.33■□□□□ 0.36
CCKBRP32239 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCKBRP32239 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCKBRP32239 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCKBRP32239 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCKBRP32239 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.32■□□□□ 0.36
CCKBRP32239 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCKBRP32239 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.32■□□□□ 0.36
CCKBRP32239 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.32■□□□□ 0.36
CCKBRP32239 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCKBRP32239 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCKBRP32239 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
CCKBRP32239 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.32■□□□□ 0.36
CCKBRP32239 MTCL1P1-201ENST00000446207 792 ntBASIC17.32■□□□□ 0.36
CCKBRP32239 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.32■□□□□ 0.36
CCKBRP32239 SCARNA2-201ENST00000458748 420 ntBASIC17.32■□□□□ 0.36
CCKBRP32239 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.32■□□□□ 0.36
CCKBRP32239 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.32■□□□□ 0.36
CCKBRP32239 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 SLC25A1P1-201ENST00000528351 927 ntBASIC17.32■□□□□ 0.36
CCKBRP32239 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.32■□□□□ 0.36
CCKBRP32239 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.32■□□□□ 0.36
CCKBRP32239 AL138831.2-201ENST00000606564 490 ntBASIC17.32■□□□□ 0.36
CCKBRP32239 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCKBRP32239 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.32■□□□□ 0.36
CCKBRP32239 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.31■□□□□ 0.36
CCKBRP32239 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.31■□□□□ 0.36
CCKBRP32239 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CCKBRP32239 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.31■□□□□ 0.36
CCKBRP32239 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.31■□□□□ 0.36
CCKBRP32239 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCKBRP32239 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CCKBRP32239 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCKBRP32239 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.31■□□□□ 0.36
CCKBRP32239 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCKBRP32239 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.31■□□□□ 0.36
CCKBRP32239 KRT18P58-201ENST00000527480 1120 ntBASIC17.31■□□□□ 0.36
CCKBRP32239 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.31■□□□□ 0.36
CCKBRP32239 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.31■□□□□ 0.36
CCKBRP32239 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.31■□□□□ 0.36
CCKBRP32239 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms