Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.51■□□□□ 0.87
CNGA1P29973 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNGA1P29973 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.51■□□□□ 0.87
CNGA1P29973 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.51■□□□□ 0.87
CNGA1P29973 AC009533.2-201ENST00000543664 586 ntBASIC20.51■□□□□ 0.87
CNGA1P29973 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.51■□□□□ 0.87
CNGA1P29973 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CNGA1P29973 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.51■□□□□ 0.87
CNGA1P29973 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNGA1P29973 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.51■□□□□ 0.87
CNGA1P29973 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.51■□□□□ 0.87
CNGA1P29973 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.51■□□□□ 0.87
CNGA1P29973 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CNGA1P29973 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNGA1P29973 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNGA1P29973 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 AC138932.1-201ENST00000534164 6830 ntBASIC20.5■□□□□ 0.87
CNGA1P29973 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.5■□□□□ 0.87
CNGA1P29973 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CNGA1P29973 TNXA-203ENST00000507684 2038 ntBASIC20.5■□□□□ 0.87
CNGA1P29973 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.5■□□□□ 0.87
CNGA1P29973 MIR149-201ENST00000384879 89 ntBASIC20.5■□□□□ 0.87
CNGA1P29973 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.5■□□□□ 0.87
CNGA1P29973 RPS2P1-201ENST00000434010 821 ntBASIC20.5■□□□□ 0.87
CNGA1P29973 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CNGA1P29973 AC113404.2-201ENST00000507884 177 ntBASIC20.5■□□□□ 0.87
CNGA1P29973 AC021087.4-201ENST00000563761 564 ntBASIC20.5■□□□□ 0.87
CNGA1P29973 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 AC027601.4-201ENST00000611259 610 ntBASIC20.5■□□□□ 0.87
CNGA1P29973 AC055717.3-201ENST00000622967 595 ntBASIC20.5■□□□□ 0.87
CNGA1P29973 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.5■□□□□ 0.87
CNGA1P29973 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CNGA1P29973 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.5■□□□□ 0.87
CNGA1P29973 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.5■□□□□ 0.87
CNGA1P29973 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CNGA1P29973 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CNGA1P29973 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNGA1P29973 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 MED15P5-201ENST00000423150 992 ntBASIC20.49■□□□□ 0.87
CNGA1P29973 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.49■□□□□ 0.87
CNGA1P29973 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 AC092910.1-201ENST00000482027 1129 ntBASIC20.49■□□□□ 0.87
CNGA1P29973 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.49■□□□□ 0.87
CNGA1P29973 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.49■□□□□ 0.87
CNGA1P29973 AL356488.2-201ENST00000602755 427 ntBASIC20.49■□□□□ 0.87
CNGA1P29973 AC140113.2-201ENST00000604370 208 ntBASIC20.49■□□□□ 0.87
CNGA1P29973 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.49■□□□□ 0.87
CNGA1P29973 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.49■□□□□ 0.87
CNGA1P29973 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.49■□□□□ 0.87
CNGA1P29973 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.49■□□□□ 0.87
CNGA1P29973 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.49■□□□□ 0.87
CNGA1P29973 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.49■□□□□ 0.87
CNGA1P29973 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.49■□□□□ 0.87
CNGA1P29973 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNGA1P29973 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.48■□□□□ 0.87
CNGA1P29973 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.48■□□□□ 0.87
CNGA1P29973 PGAM5P1-201ENST00000518923 814 ntBASIC20.48■□□□□ 0.87
CNGA1P29973 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.48■□□□□ 0.87
CNGA1P29973 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CNGA1P29973 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.48■□□□□ 0.87
CNGA1P29973 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CNGA1P29973 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNGA1P29973 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNGA1P29973 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.47■□□□□ 0.87
CNGA1P29973 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms