Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 PRSS29P-201ENST00000440800 595 ntBASIC20.26■□□□□ 0.83
CTGFP29279 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.26■□□□□ 0.83
CTGFP29279 RPS15P9-201ENST00000494093 319 ntBASIC20.26■□□□□ 0.83
CTGFP29279 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTGFP29279 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.26■□□□□ 0.83
CTGFP29279 AL096865.1-201ENST00000606796 927 ntBASIC20.26■□□□□ 0.83
CTGFP29279 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.26■□□□□ 0.83
CTGFP29279 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTGFP29279 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTGFP29279 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.25■□□□□ 0.83
CTGFP29279 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CTGFP29279 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.25■□□□□ 0.83
CTGFP29279 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.25■□□□□ 0.83
CTGFP29279 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CTGFP29279 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.25■□□□□ 0.83
CTGFP29279 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.25■□□□□ 0.83
CTGFP29279 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
CTGFP29279 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.25■□□□□ 0.83
CTGFP29279 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.25■□□□□ 0.83
CTGFP29279 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.25■□□□□ 0.83
CTGFP29279 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.25■□□□□ 0.83
CTGFP29279 PDPK2P-202ENST00000562415 1191 ntBASIC20.25■□□□□ 0.83
CTGFP29279 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.25■□□□□ 0.83
CTGFP29279 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.25■□□□□ 0.83
CTGFP29279 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.25■□□□□ 0.83
CTGFP29279 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CTGFP29279 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CTGFP29279 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.25■□□□□ 0.83
CTGFP29279 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTGFP29279 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CTGFP29279 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CTGFP29279 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.24■□□□□ 0.83
CTGFP29279 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CTGFP29279 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.24■□□□□ 0.83
CTGFP29279 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CTGFP29279 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.24■□□□□ 0.83
CTGFP29279 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.24■□□□□ 0.83
CTGFP29279 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.24■□□□□ 0.83
CTGFP29279 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CTGFP29279 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.24■□□□□ 0.83
CTGFP29279 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.24■□□□□ 0.83
CTGFP29279 AC093512.1-201ENST00000617969 520 ntBASIC20.24■□□□□ 0.83
CTGFP29279 AC004877.2-201ENST00000623941 599 ntBASIC20.24■□□□□ 0.83
CTGFP29279 AC010507.1-201ENST00000633895 436 ntBASIC20.24■□□□□ 0.83
CTGFP29279 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.24■□□□□ 0.83
CTGFP29279 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CTGFP29279 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTGFP29279 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CTGFP29279 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.24■□□□□ 0.83
CTGFP29279 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.24■□□□□ 0.83
CTGFP29279 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CTGFP29279 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.23■□□□□ 0.83
CTGFP29279 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CTGFP29279 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTGFP29279 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTGFP29279 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.23■□□□□ 0.83
CTGFP29279 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.23■□□□□ 0.83
CTGFP29279 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTGFP29279 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTGFP29279 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTGFP29279 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.23■□□□□ 0.83
CTGFP29279 AC244107.1-201ENST00000442033 332 ntBASIC20.23■□□□□ 0.83
CTGFP29279 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CTGFP29279 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.23■□□□□ 0.83
CTGFP29279 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.23■□□□□ 0.83
CTGFP29279 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.23■□□□□ 0.83
CTGFP29279 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.23■□□□□ 0.83
CTGFP29279 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTGFP29279 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.23■□□□□ 0.83
CTGFP29279 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTGFP29279 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CTGFP29279 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTGFP29279 AC132938.5-201ENST00000624980 1813 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms