Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.02■■□□□ 1.12
KCNA3P22001 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.02■■□□□ 1.12
KCNA3P22001 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KCNA3P22001 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KCNA3P22001 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNA3P22001 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
KCNA3P22001 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
KCNA3P22001 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.02■■□□□ 1.11
KCNA3P22001 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
KCNA3P22001 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
KCNA3P22001 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
KCNA3P22001 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
KCNA3P22001 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.01■■□□□ 1.11
KCNA3P22001 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.01■■□□□ 1.11
KCNA3P22001 AC092474.2-201ENST00000424288 719 ntBASIC22.01■■□□□ 1.11
KCNA3P22001 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.01■■□□□ 1.11
KCNA3P22001 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.01■■□□□ 1.11
KCNA3P22001 KRT19P2-202ENST00000557173 1012 ntBASIC22.01■■□□□ 1.11
KCNA3P22001 AC073592.5-201ENST00000624854 528 ntBASIC22.01■■□□□ 1.11
KCNA3P22001 AL513210.1-201ENST00000629608 234 ntBASIC22.01■■□□□ 1.11
KCNA3P22001 AC010507.1-201ENST00000633895 436 ntBASIC22.01■■□□□ 1.11
KCNA3P22001 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
KCNA3P22001 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNA3P22001 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.01■■□□□ 1.11
KCNA3P22001 AL499627.1-201ENST00000569373 2188 ntBASIC22.01■■□□□ 1.11
KCNA3P22001 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.01■■□□□ 1.11
KCNA3P22001 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
KCNA3P22001 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22■■□□□ 1.11
KCNA3P22001 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22■■□□□ 1.11
KCNA3P22001 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22■■□□□ 1.11
KCNA3P22001 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22■■□□□ 1.11
KCNA3P22001 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
KCNA3P22001 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22■■□□□ 1.11
KCNA3P22001 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22■■□□□ 1.11
KCNA3P22001 AC109322.1-201ENST00000524499 1264 ntBASIC22■■□□□ 1.11
KCNA3P22001 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22■■□□□ 1.11
KCNA3P22001 MIR4745-201ENST00000577608 62 ntBASIC22■■□□□ 1.11
KCNA3P22001 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22■■□□□ 1.11
KCNA3P22001 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
KCNA3P22001 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22■■□□□ 1.11
KCNA3P22001 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KCNA3P22001 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KCNA3P22001 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KCNA3P22001 AL032819.2-201ENST00000624543 2162 ntBASIC21.99■■□□□ 1.11
KCNA3P22001 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KCNA3P22001 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
KCNA3P22001 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
KCNA3P22001 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KCNA3P22001 AC132938.6-201ENST00000623828 1655 ntBASIC21.99■■□□□ 1.11
KCNA3P22001 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.99■■□□□ 1.11
KCNA3P22001 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KCNA3P22001 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KCNA3P22001 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KCNA3P22001 RHOQP3-201ENST00000437982 621 ntBASIC21.99■■□□□ 1.11
KCNA3P22001 ACTG1P14-201ENST00000446382 1122 ntBASIC21.99■■□□□ 1.11
KCNA3P22001 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.99■■□□□ 1.11
KCNA3P22001 AC096734.2-201ENST00000562054 433 ntBASIC21.99■■□□□ 1.11
KCNA3P22001 AC004449.1-201ENST00000564240 433 ntBASIC21.99■■□□□ 1.11
KCNA3P22001 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.99■■□□□ 1.11
KCNA3P22001 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
KCNA3P22001 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
KCNA3P22001 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 AL158211.5-201ENST00000623583 2518 ntBASIC21.98■■□□□ 1.11
KCNA3P22001 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.98■■□□□ 1.11
KCNA3P22001 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 AC004461.1-201ENST00000412461 403 ntBASIC21.98■■□□□ 1.11
KCNA3P22001 FAM58CP-201ENST00000435741 640 ntBASIC21.98■■□□□ 1.11
KCNA3P22001 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.98■■□□□ 1.11
KCNA3P22001 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.98■■□□□ 1.11
KCNA3P22001 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.98■■□□□ 1.11
KCNA3P22001 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.98■■□□□ 1.11
KCNA3P22001 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms