Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT4P19013 NKILA-202ENST00000614771 2598 ntBASIC18.15■□□□□ 0.5
KRT4P19013 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT4P19013 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT4P19013 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
KRT4P19013 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 MIR935-201ENST00000401179 91 ntBASIC18.15■□□□□ 0.5
KRT4P19013 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT4P19013 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.15■□□□□ 0.5
KRT4P19013 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
KRT4P19013 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT4P19013 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
KRT4P19013 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
KRT4P19013 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT4P19013 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.15■□□□□ 0.5
KRT4P19013 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT4P19013 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.14■□□□□ 0.5
KRT4P19013 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
KRT4P19013 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KRT4P19013 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
KRT4P19013 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT4P19013 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT4P19013 AC073648.6-201ENST00000641589 218 ntBASIC18.14■□□□□ 0.49
KRT4P19013 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
KRT4P19013 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.14■□□□□ 0.49
KRT4P19013 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.14■□□□□ 0.49
KRT4P19013 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KRT4P19013 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.13■□□□□ 0.49
KRT4P19013 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
KRT4P19013 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
KRT4P19013 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT4P19013 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT4P19013 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT4P19013 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
KRT4P19013 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.13■□□□□ 0.49
KRT4P19013 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT4P19013 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KRT4P19013 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT4P19013 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT4P19013 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms