Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 KRT18P13-201ENST00000400056 1290 ntBASIC19.82■□□□□ 0.76
HOXD8P13378 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 SPDYE21P-201ENST00000413323 827 ntBASIC19.82■□□□□ 0.76
HOXD8P13378 KRT18P27-201ENST00000427733 1299 ntBASIC19.82■□□□□ 0.76
HOXD8P13378 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXD8P13378 AC092910.1-201ENST00000482027 1129 ntBASIC19.82■□□□□ 0.76
HOXD8P13378 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
HOXD8P13378 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXD8P13378 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXD8P13378 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXD8P13378 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXD8P13378 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXD8P13378 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HOXD8P13378 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HOXD8P13378 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXD8P13378 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXD8P13378 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXD8P13378 RNA5SP415-201ENST00000517246 115 ntBASIC19.81■□□□□ 0.76
HOXD8P13378 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.81■□□□□ 0.76
HOXD8P13378 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXD8P13378 Z83851.2-201ENST00000609564 659 ntBASIC19.81■□□□□ 0.76
HOXD8P13378 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 FAM197Y3-203ENST00000618346 717 ntBASIC19.81■□□□□ 0.76
HOXD8P13378 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXD8P13378 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXD8P13378 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD8P13378 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
HOXD8P13378 AL353593.2-201ENST00000602529 1483 ntBASIC19.8■□□□□ 0.76
HOXD8P13378 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HOXD8P13378 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HOXD8P13378 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXD8P13378 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXD8P13378 BX005266.1-201ENST00000473402 457 ntBASIC19.8■□□□□ 0.76
HOXD8P13378 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXD8P13378 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.8■□□□□ 0.76
HOXD8P13378 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD8P13378 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD8P13378 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 TERC-201ENST00000602385 541 ntBASIC19.8■□□□□ 0.76
HOXD8P13378 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 AC027601.4-201ENST00000611259 610 ntBASIC19.8■□□□□ 0.76
HOXD8P13378 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXD8P13378 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOXD8P13378 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
HOXD8P13378 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXD8P13378 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXD8P13378 AP002414.3-201ENST00000589352 1468 ntBASIC19.79■□□□□ 0.76
HOXD8P13378 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD8P13378 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD8P13378 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD8P13378 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD8P13378 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD8P13378 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXD8P13378 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXD8P13378 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HOXD8P13378 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXD8P13378 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXD8P13378 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 AC093677.2-201ENST00000600169 1863 ntBASIC19.79■□□□□ 0.76
HOXD8P13378 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 AL096828.2-201ENST00000567259 1965 ntBASIC19.79■□□□□ 0.76
HOXD8P13378 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HOXD8P13378 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXD8P13378 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXD8P13378 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXD8P13378 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXD8P13378 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXD8P13378 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXD8P13378 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms