Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 RCN1P1-201ENST00000400413 996 ntBASIC19.05■□□□□ 0.64
KRT3P12035 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.05■□□□□ 0.64
KRT3P12035 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT3P12035 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT3P12035 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT3P12035 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT3P12035 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT3P12035 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRT3P12035 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT3P12035 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT3P12035 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT3P12035 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT3P12035 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KRT3P12035 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT3P12035 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
KRT3P12035 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
KRT3P12035 FAM8A6P-201ENST00000407496 1135 ntBASIC19.04■□□□□ 0.64
KRT3P12035 HLA-F-220ENST00000434407 884 ntBASIC19.04■□□□□ 0.64
KRT3P12035 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT3P12035 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT3P12035 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT3P12035 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT3P12035 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT3P12035 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT3P12035 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 KRT89P-201ENST00000620027 1478 ntBASIC19.03■□□□□ 0.64
KRT3P12035 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
KRT3P12035 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
KRT3P12035 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT3P12035 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.03■□□□□ 0.64
KRT3P12035 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT3P12035 KRT18P38-201ENST00000449496 1282 ntBASIC19.03■□□□□ 0.64
KRT3P12035 AC092597.1-201ENST00000487352 616 ntBASIC19.03■□□□□ 0.64
KRT3P12035 AC113404.2-201ENST00000507884 177 ntBASIC19.03■□□□□ 0.64
KRT3P12035 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.03■□□□□ 0.64
KRT3P12035 RN7SL850P-201ENST00000579959 291 ntBASIC19.03■□□□□ 0.64
KRT3P12035 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
KRT3P12035 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
KRT3P12035 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
KRT3P12035 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
KRT3P12035 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRT3P12035 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT3P12035 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT3P12035 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT3P12035 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
KRT3P12035 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.02■□□□□ 0.64
KRT3P12035 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT3P12035 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT3P12035 LINC00602-201ENST00000629776 2065 ntBASIC19.02■□□□□ 0.64
KRT3P12035 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT3P12035 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KRT3P12035 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT3P12035 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT3P12035 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT3P12035 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT3P12035 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms