Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.95■□□□□ 0.94
PARP1P09874 DUSP5P1-201ENST00000441325 1139 ntBASIC20.95■□□□□ 0.94
PARP1P09874 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.95■□□□□ 0.94
PARP1P09874 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.95■□□□□ 0.94
PARP1P09874 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 PRELID1P1-202ENST00000567272 903 ntBASIC20.95■□□□□ 0.94
PARP1P09874 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.95■□□□□ 0.94
PARP1P09874 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.95■□□□□ 0.94
PARP1P09874 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PARP1P09874 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
PARP1P09874 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.95■□□□□ 0.94
PARP1P09874 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.94■□□□□ 0.94
PARP1P09874 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
PARP1P09874 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PARP1P09874 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PARP1P09874 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.94■□□□□ 0.94
PARP1P09874 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.94■□□□□ 0.94
PARP1P09874 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PARP1P09874 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.94■□□□□ 0.94
PARP1P09874 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.94■□□□□ 0.94
PARP1P09874 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARP1P09874 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PARP1P09874 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.93■□□□□ 0.94
PARP1P09874 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 IGHV3-47-201ENST00000425060 335 ntBASIC20.93■□□□□ 0.94
PARP1P09874 NUS1P1-201ENST00000446295 882 ntBASIC20.93■□□□□ 0.94
PARP1P09874 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.93■□□□□ 0.94
PARP1P09874 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.93■□□□□ 0.94
PARP1P09874 AC112698.1-201ENST00000510299 916 ntBASIC20.93■□□□□ 0.94
PARP1P09874 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.93■□□□□ 0.94
PARP1P09874 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.93■□□□□ 0.94
PARP1P09874 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.93■□□□□ 0.94
PARP1P09874 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PARP1P09874 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PARP1P09874 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.92■□□□□ 0.94
PARP1P09874 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PARP1P09874 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PARP1P09874 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PARP1P09874 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 DUTP2-201ENST00000519164 463 ntBASIC20.92■□□□□ 0.94
PARP1P09874 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.92■□□□□ 0.94
PARP1P09874 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.92■□□□□ 0.94
PARP1P09874 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARP1P09874 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms