Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.73■□□□□ 0.59
CD48P09326 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CD48P09326 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CD48P09326 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
CD48P09326 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CD48P09326 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.73■□□□□ 0.59
CD48P09326 DUTP2-201ENST00000519164 463 ntBASIC18.73■□□□□ 0.59
CD48P09326 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CD48P09326 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.73■□□□□ 0.59
CD48P09326 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CD48P09326 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CD48P09326 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.73■□□□□ 0.59
CD48P09326 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD48P09326 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
CD48P09326 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CD48P09326 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.72■□□□□ 0.59
CD48P09326 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CD48P09326 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CD48P09326 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.72■□□□□ 0.59
CD48P09326 RCN1P1-201ENST00000400413 996 ntBASIC18.72■□□□□ 0.59
CD48P09326 TSPY5P-201ENST00000426936 936 ntBASIC18.72■□□□□ 0.59
CD48P09326 HLA-F-220ENST00000434407 884 ntBASIC18.72■□□□□ 0.59
CD48P09326 AL359075.1-203ENST00000462729 1002 ntBASIC18.72■□□□□ 0.59
CD48P09326 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.72■□□□□ 0.59
CD48P09326 AC024563.2-201ENST00000603282 481 ntBASIC18.72■□□□□ 0.59
CD48P09326 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CD48P09326 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CD48P09326 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.72■□□□□ 0.59
CD48P09326 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CD48P09326 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD48P09326 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.71■□□□□ 0.59
CD48P09326 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.71■□□□□ 0.59
CD48P09326 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.71■□□□□ 0.59
CD48P09326 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 AK4P3-201ENST00000418260 669 ntBASIC18.71■□□□□ 0.59
CD48P09326 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.71■□□□□ 0.59
CD48P09326 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CD48P09326 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.71■□□□□ 0.59
CD48P09326 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.71■□□□□ 0.59
CD48P09326 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.71■□□□□ 0.59
CD48P09326 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CD48P09326 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CD48P09326 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.71■□□□□ 0.59
CD48P09326 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.71■□□□□ 0.59
CD48P09326 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD48P09326 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.71■□□□□ 0.59
CD48P09326 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
CD48P09326 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.7■□□□□ 0.58
CD48P09326 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.7■□□□□ 0.58
CD48P09326 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.7■□□□□ 0.58
CD48P09326 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD48P09326 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms