Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
RHOP08100 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RHOP08100 AC107918.4-202ENST00000641623 219 ntBASIC18.65■□□□□ 0.58
RHOP08100 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.65■□□□□ 0.58
RHOP08100 AC120498.9-201ENST00000339021 3867 ntBASIC18.65■□□□□ 0.58
RHOP08100 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.64■□□□□ 0.58
RHOP08100 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.64■□□□□ 0.58
RHOP08100 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RHOP08100 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.64■□□□□ 0.58
RHOP08100 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
RHOP08100 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RHOP08100 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RHOP08100 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.64■□□□□ 0.57
RHOP08100 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RHOP08100 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RHOP08100 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.64■□□□□ 0.57
RHOP08100 MED15P5-201ENST00000423150 992 ntBASIC18.64■□□□□ 0.57
RHOP08100 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.64■□□□□ 0.57
RHOP08100 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.64■□□□□ 0.57
RHOP08100 AC105339.3-201ENST00000560043 636 ntBASIC18.64■□□□□ 0.57
RHOP08100 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.64■□□□□ 0.57
RHOP08100 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOP08100 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOP08100 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RHOP08100 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RHOP08100 Z83851.2-201ENST00000609564 659 ntBASIC18.64■□□□□ 0.57
RHOP08100 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOP08100 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RHOP08100 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RHOP08100 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOP08100 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RHOP08100 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOP08100 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOP08100 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RHOP08100 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RHOP08100 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOP08100 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOP08100 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
RHOP08100 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.63■□□□□ 0.57
RHOP08100 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.63■□□□□ 0.57
RHOP08100 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.63■□□□□ 0.57
RHOP08100 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.63■□□□□ 0.57
RHOP08100 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.63■□□□□ 0.57
RHOP08100 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.63■□□□□ 0.57
RHOP08100 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 AC096633.1-201ENST00000422446 749 ntBASIC18.63■□□□□ 0.57
RHOP08100 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.63■□□□□ 0.57
RHOP08100 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.63■□□□□ 0.57
RHOP08100 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.63■□□□□ 0.57
RHOP08100 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.63■□□□□ 0.57
RHOP08100 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.63■□□□□ 0.57
RHOP08100 AL356488.2-201ENST00000602755 427 ntBASIC18.63■□□□□ 0.57
RHOP08100 FAM197Y3-203ENST00000618346 717 ntBASIC18.63■□□□□ 0.57
RHOP08100 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.63■□□□□ 0.57
RHOP08100 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.63■□□□□ 0.57
RHOP08100 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
RHOP08100 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 AL031598.1-201ENST00000561511 1773 ntBASIC18.63■□□□□ 0.57
RHOP08100 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RHOP08100 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.62■□□□□ 0.57
RHOP08100 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RHOP08100 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RHOP08100 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 BX005266.1-201ENST00000473402 457 ntBASIC18.62■□□□□ 0.57
RHOP08100 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RHOP08100 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.62■□□□□ 0.57
RHOP08100 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 AP002414.3-201ENST00000589352 1468 ntBASIC18.62■□□□□ 0.57
RHOP08100 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.62■□□□□ 0.57
RHOP08100 AC010460.3-201ENST00000511359 1579 ntBASIC18.62■□□□□ 0.57
RHOP08100 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.62■□□□□ 0.57
RHOP08100 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RHOP08100 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RHOP08100 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RHOP08100 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RHOP08100 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RHOP08100 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RHOP08100 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms