Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPB1P04440 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DPB1P04440 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-DPB1P04440 AL023806.1-201ENST00000603994 1649 ntBASIC16.27■□□□□ 0.19
HLA-DPB1P04440 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 GMCL1P1-201ENST00000463439 1581 ntBASIC16.26■□□□□ 0.19
HLA-DPB1P04440 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 AC006116.8-202ENST00000587620 1550 ntBASIC16.26■□□□□ 0.19
HLA-DPB1P04440 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 PP12613-201ENST00000424958 2230 ntBASIC16.26■□□□□ 0.19
HLA-DPB1P04440 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 AC116562.2-201ENST00000507042 360 ntBASIC16.26■□□□□ 0.19
HLA-DPB1P04440 KRT18P41-201ENST00000518924 1277 ntBASIC16.26■□□□□ 0.19
HLA-DPB1P04440 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 MIR4497-201ENST00000583208 89 ntBASIC16.26■□□□□ 0.19
HLA-DPB1P04440 MIR4785-201ENST00000585005 73 ntBASIC16.26■□□□□ 0.19
HLA-DPB1P04440 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DPB1P04440 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DPB1P04440 CROCCP1-201ENST00000426910 5675 ntBASIC16.25■□□□□ 0.19
HLA-DPB1P04440 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms