Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
IFNA1P01562 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.32□□□□□ -0.12
IFNA1P01562 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
IFNA1P01562 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.32□□□□□ -0.12
IFNA1P01562 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.32□□□□□ -0.12
IFNA1P01562 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
IFNA1P01562 AC008894.3-201ENST00000624324 3103 ntBASIC14.32□□□□□ -0.12
IFNA1P01562 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IFNA1P01562 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
IFNA1P01562 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.31□□□□□ -0.12
IFNA1P01562 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.31□□□□□ -0.12
IFNA1P01562 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.31□□□□□ -0.12
IFNA1P01562 AL391005.1-201ENST00000623953 2435 ntBASIC14.31□□□□□ -0.12
IFNA1P01562 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.31□□□□□ -0.12
IFNA1P01562 AL031432.3-201ENST00000607698 485 ntBASIC14.31□□□□□ -0.12
IFNA1P01562 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.31□□□□□ -0.12
IFNA1P01562 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.31□□□□□ -0.12
IFNA1P01562 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.31□□□□□ -0.12
IFNA1P01562 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 AC068338.2-201ENST00000563278 1430 ntBASIC14.31□□□□□ -0.12
IFNA1P01562 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IFNA1P01562 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
IFNA1P01562 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
IFNA1P01562 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IFNA1P01562 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.3□□□□□ -0.12
IFNA1P01562 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
IFNA1P01562 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.3□□□□□ -0.12
IFNA1P01562 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 KRT18P11-201ENST00000435214 1283 ntBASIC14.3□□□□□ -0.12
IFNA1P01562 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.3□□□□□ -0.12
IFNA1P01562 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 AC005829.2-201ENST00000571422 1056 ntBASIC14.3□□□□□ -0.12
IFNA1P01562 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.3□□□□□ -0.12
IFNA1P01562 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IFNA1P01562 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
IFNA1P01562 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFNA1P01562 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms