Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.27■□□□□ 0.35
DUX1O43812 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DUX1O43812 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DUX1O43812 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DUX1O43812 AC132938.6-201ENST00000623828 1655 ntBASIC17.26■□□□□ 0.35
DUX1O43812 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DUX1O43812 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DUX1O43812 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.26■□□□□ 0.35
DUX1O43812 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.26■□□□□ 0.35
DUX1O43812 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 MTDHP3-201ENST00000594186 672 ntBASIC17.26■□□□□ 0.35
DUX1O43812 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.26■□□□□ 0.35
DUX1O43812 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.26■□□□□ 0.35
DUX1O43812 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DUX1O43812 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX1O43812 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX1O43812 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DUX1O43812 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.25■□□□□ 0.35
DUX1O43812 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX1O43812 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX1O43812 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.25■□□□□ 0.35
DUX1O43812 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX1O43812 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX1O43812 AC093909.1-201ENST00000504731 1122 ntBASIC17.25■□□□□ 0.35
DUX1O43812 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX1O43812 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.25■□□□□ 0.35
DUX1O43812 AP001269.4-201ENST00000609611 512 ntBASIC17.25■□□□□ 0.35
DUX1O43812 AC120114.3-201ENST00000611923 658 ntBASIC17.25■□□□□ 0.35
DUX1O43812 AC006538.3-201ENST00000612495 578 ntBASIC17.25■□□□□ 0.35
DUX1O43812 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.25■□□□□ 0.35
DUX1O43812 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
DUX1O43812 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
DUX1O43812 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.25■□□□□ 0.35
DUX1O43812 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.25■□□□□ 0.35
DUX1O43812 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.25■□□□□ 0.35
DUX1O43812 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX1O43812 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
DUX1O43812 AC022898.2-201ENST00000616822 1312 ntBASIC17.24■□□□□ 0.35
DUX1O43812 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.24■□□□□ 0.35
DUX1O43812 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.24■□□□□ 0.35
DUX1O43812 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.24■□□□□ 0.35
DUX1O43812 FAM220CP-201ENST00000395253 831 ntBASIC17.24■□□□□ 0.35
DUX1O43812 FGFR3P6-201ENST00000457012 610 ntBASIC17.24■□□□□ 0.35
DUX1O43812 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.24■□□□□ 0.35
DUX1O43812 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.24■□□□□ 0.35
DUX1O43812 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DUX1O43812 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.24■□□□□ 0.35
DUX1O43812 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
DUX1O43812 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX1O43812 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms