Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDELR3O43731 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.3■□□□□ 0.52
KDELR3O43731 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
KDELR3O43731 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KDELR3O43731 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDELR3O43731 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.3■□□□□ 0.52
KDELR3O43731 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDELR3O43731 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDELR3O43731 AC091607.1-201ENST00000490318 1060 ntBASIC18.3■□□□□ 0.52
KDELR3O43731 AP000867.3-201ENST00000524675 377 ntBASIC18.3■□□□□ 0.52
KDELR3O43731 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.3■□□□□ 0.52
KDELR3O43731 Z69720.1-201ENST00000601483 472 ntBASIC18.3■□□□□ 0.52
KDELR3O43731 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.3■□□□□ 0.52
KDELR3O43731 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.3■□□□□ 0.52
KDELR3O43731 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDELR3O43731 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.3■□□□□ 0.52
KDELR3O43731 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.3■□□□□ 0.52
KDELR3O43731 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDELR3O43731 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDELR3O43731 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.3■□□□□ 0.52
KDELR3O43731 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDELR3O43731 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.3■□□□□ 0.52
KDELR3O43731 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KDELR3O43731 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.29■□□□□ 0.52
KDELR3O43731 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.29■□□□□ 0.52
KDELR3O43731 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.29■□□□□ 0.52
KDELR3O43731 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KDELR3O43731 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.29■□□□□ 0.52
KDELR3O43731 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 KRT17P6-201ENST00000453795 1220 ntBASIC18.29■□□□□ 0.52
KDELR3O43731 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.29■□□□□ 0.52
KDELR3O43731 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.29■□□□□ 0.52
KDELR3O43731 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.29■□□□□ 0.52
KDELR3O43731 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.29■□□□□ 0.52
KDELR3O43731 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.29■□□□□ 0.52
KDELR3O43731 AP005901.3-202ENST00000581653 237 ntBASIC18.29■□□□□ 0.52
KDELR3O43731 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KDELR3O43731 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.29■□□□□ 0.52
KDELR3O43731 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.29■□□□□ 0.52
KDELR3O43731 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
KDELR3O43731 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KDELR3O43731 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDELR3O43731 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.29■□□□□ 0.52
KDELR3O43731 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.29■□□□□ 0.52
KDELR3O43731 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.28■□□□□ 0.52
KDELR3O43731 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.28■□□□□ 0.52
KDELR3O43731 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
KDELR3O43731 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
KDELR3O43731 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.28■□□□□ 0.52
KDELR3O43731 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.28■□□□□ 0.52
KDELR3O43731 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.28■□□□□ 0.52
KDELR3O43731 AC012615.1-201ENST00000565797 1299 ntBASIC18.28■□□□□ 0.52
KDELR3O43731 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
KDELR3O43731 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.28■□□□□ 0.52
KDELR3O43731 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KDELR3O43731 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KDELR3O43731 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 AL390961.4-201ENST00000623958 2535 ntBASIC18.28■□□□□ 0.52
KDELR3O43731 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KDELR3O43731 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.28■□□□□ 0.52
KDELR3O43731 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
KDELR3O43731 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KDELR3O43731 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.27■□□□□ 0.52
KDELR3O43731 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.27■□□□□ 0.52
KDELR3O43731 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.27■□□□□ 0.52
KDELR3O43731 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KDELR3O43731 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms