Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.09■■□□□ 1.29
KCNQ3O43525 SCARNA2-201ENST00000458748 420 ntBASIC23.09■■□□□ 1.29
KCNQ3O43525 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.09■■□□□ 1.29
KCNQ3O43525 AC073648.2-201ENST00000510116 352 ntBASIC23.09■■□□□ 1.29
KCNQ3O43525 NKAPP1-205ENST00000585790 367 ntBASIC23.09■■□□□ 1.29
KCNQ3O43525 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNQ3O43525 AC025062.2-201ENST00000605477 670 ntBASIC23.09■■□□□ 1.29
KCNQ3O43525 AP000867.4-201ENST00000641616 219 ntBASIC23.09■■□□□ 1.29
KCNQ3O43525 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNQ3O43525 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNQ3O43525 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNQ3O43525 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KCNQ3O43525 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNQ3O43525 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KCNQ3O43525 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNQ3O43525 AC018445.3-201ENST00000624177 1945 ntBASIC23.08■■□□□ 1.29
KCNQ3O43525 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.08■■□□□ 1.29
KCNQ3O43525 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNQ3O43525 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.08■■□□□ 1.29
KCNQ3O43525 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.08■■□□□ 1.29
KCNQ3O43525 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNQ3O43525 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNQ3O43525 AC093677.2-201ENST00000600169 1863 ntBASIC23.08■■□□□ 1.29
KCNQ3O43525 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
KCNQ3O43525 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNQ3O43525 AC135776.1-201ENST00000319817 2481 ntBASIC23.08■■□□□ 1.29
KCNQ3O43525 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNQ3O43525 AC120498.9-201ENST00000339021 3867 ntBASIC23.08■■□□□ 1.29
KCNQ3O43525 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
KCNQ3O43525 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
KCNQ3O43525 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
KCNQ3O43525 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
KCNQ3O43525 AC097374.2-201ENST00000618617 1306 ntBASIC23.08■■□□□ 1.28
KCNQ3O43525 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC23.07■■□□□ 1.28
KCNQ3O43525 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.07■■□□□ 1.28
KCNQ3O43525 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.07■■□□□ 1.28
KCNQ3O43525 AC096633.1-201ENST00000422446 749 ntBASIC23.07■■□□□ 1.28
KCNQ3O43525 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.07■■□□□ 1.28
KCNQ3O43525 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.07■■□□□ 1.28
KCNQ3O43525 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.07■■□□□ 1.28
KCNQ3O43525 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
KCNQ3O43525 AC139887.3-201ENST00000568585 713 ntBASIC23.07■■□□□ 1.28
KCNQ3O43525 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.07■■□□□ 1.28
KCNQ3O43525 TNXA-203ENST00000507684 2038 ntBASIC23.07■■□□□ 1.28
KCNQ3O43525 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.07■■□□□ 1.28
KCNQ3O43525 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
KCNQ3O43525 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
KCNQ3O43525 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
KCNQ3O43525 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
KCNQ3O43525 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
KCNQ3O43525 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNQ3O43525 AL356309.3-201ENST00000624132 1934 ntBASIC23.06■■□□□ 1.28
KCNQ3O43525 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNQ3O43525 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNQ3O43525 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
KCNQ3O43525 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.06■■□□□ 1.28
KCNQ3O43525 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.06■■□□□ 1.28
KCNQ3O43525 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNQ3O43525 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNQ3O43525 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.06■■□□□ 1.28
KCNQ3O43525 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
KCNQ3O43525 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.06■■□□□ 1.28
KCNQ3O43525 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
KCNQ3O43525 AC004817.3-201ENST00000602957 2129 ntBASIC23.06■■□□□ 1.28
KCNQ3O43525 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
KCNQ3O43525 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
KCNQ3O43525 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.06■■□□□ 1.28
KCNQ3O43525 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
KCNQ3O43525 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.05■■□□□ 1.28
KCNQ3O43525 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms