Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
NPHP1O15259 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NPHP1O15259 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.72■■□□□ 1.23
NPHP1O15259 AC020763.4-201ENST00000623414 4170 ntBASIC22.72■■□□□ 1.23
NPHP1O15259 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.72■■□□□ 1.23
NPHP1O15259 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
NPHP1O15259 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.72■■□□□ 1.23
NPHP1O15259 AC093484.2-201ENST00000580996 2166 ntBASIC22.72■■□□□ 1.23
NPHP1O15259 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NPHP1O15259 MYLKP1-201ENST00000509077 1580 ntBASIC22.72■■□□□ 1.23
NPHP1O15259 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.71■■□□□ 1.23
NPHP1O15259 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.71■■□□□ 1.23
NPHP1O15259 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
NPHP1O15259 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.71■■□□□ 1.23
NPHP1O15259 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.71■■□□□ 1.23
NPHP1O15259 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.71■■□□□ 1.23
NPHP1O15259 MED15P5-201ENST00000423150 992 ntBASIC22.71■■□□□ 1.23
NPHP1O15259 AC021087.4-201ENST00000563761 564 ntBASIC22.71■■□□□ 1.23
NPHP1O15259 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
NPHP1O15259 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.71■■□□□ 1.23
NPHP1O15259 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.71■■□□□ 1.23
NPHP1O15259 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.71■■□□□ 1.23
NPHP1O15259 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
NPHP1O15259 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.71■■□□□ 1.23
NPHP1O15259 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPHP1O15259 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.71■■□□□ 1.23
NPHP1O15259 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.71■■□□□ 1.23
NPHP1O15259 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
NPHP1O15259 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
NPHP1O15259 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
NPHP1O15259 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
NPHP1O15259 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.7■■□□□ 1.22
NPHP1O15259 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 AC027601.4-201ENST00000611259 610 ntBASIC22.7■■□□□ 1.22
NPHP1O15259 AL691403.2-201ENST00000618460 490 ntBASIC22.7■■□□□ 1.22
NPHP1O15259 AC083906.6-201ENST00000641366 219 ntBASIC22.7■■□□□ 1.22
NPHP1O15259 AP005117.1-201ENST00000584346 1413 ntBASIC22.7■■□□□ 1.22
NPHP1O15259 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.7■■□□□ 1.22
NPHP1O15259 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.7■■□□□ 1.22
NPHP1O15259 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.7■■□□□ 1.22
NPHP1O15259 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.7■■□□□ 1.22
NPHP1O15259 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.7■■□□□ 1.22
NPHP1O15259 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NPHP1O15259 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 SDHAP2-201ENST00000455183 2001 ntBASIC22.7■■□□□ 1.22
NPHP1O15259 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NPHP1O15259 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.7■■□□□ 1.22
NPHP1O15259 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPHP1O15259 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.69■■□□□ 1.22
NPHP1O15259 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 AL024508.2-201ENST00000607749 1894 ntBASIC22.69■■□□□ 1.22
NPHP1O15259 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.69■■□□□ 1.22
NPHP1O15259 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.69■■□□□ 1.22
NPHP1O15259 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.69■■□□□ 1.22
NPHP1O15259 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 OR7E14P-202ENST00000530490 1290 ntBASIC22.69■■□□□ 1.22
NPHP1O15259 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.69■■□□□ 1.22
NPHP1O15259 SART3-203ENST00000546611 1184 ntBASIC22.69■■□□□ 1.22
NPHP1O15259 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.69■■□□□ 1.22
NPHP1O15259 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.69■■□□□ 1.22
NPHP1O15259 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC22.69■■□□□ 1.22
NPHP1O15259 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPHP1O15259 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NPHP1O15259 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.69■■□□□ 1.22
NPHP1O15259 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
NPHP1O15259 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NPHP1O15259 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NPHP1O15259 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NPHP1O15259 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NPHP1O15259 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.68■■□□□ 1.22
NPHP1O15259 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NPHP1O15259 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NPHP1O15259 AL161938.1-201ENST00000569833 2180 ntBASIC22.68■■□□□ 1.22
NPHP1O15259 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms