Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.39□□□□□ -0.43
NDUFA1O15239 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NDUFA1O15239 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NDUFA1O15239 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.38□□□□□ -0.43
NDUFA1O15239 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
NDUFA1O15239 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NDUFA1O15239 ID1-201ENST00000376105 1233 ntBASIC12.38□□□□□ -0.43
NDUFA1O15239 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
NDUFA1O15239 NIFKP9-201ENST00000419265 221 ntBASIC12.38□□□□□ -0.43
NDUFA1O15239 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFA1O15239 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFA1O15239 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFA1O15239 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NDUFA1O15239 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 GMCL1P1-201ENST00000463439 1581 ntBASIC12.38□□□□□ -0.43
NDUFA1O15239 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
NDUFA1O15239 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NDUFA1O15239 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NDUFA1O15239 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.38□□□□□ -0.43
NDUFA1O15239 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 KRT8P11-201ENST00000409686 1436 ntBASIC12.37□□□□□ -0.43
NDUFA1O15239 KRT8P3-201ENST00000519669 1449 ntBASIC12.37□□□□□ -0.43
NDUFA1O15239 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
NDUFA1O15239 ESRRAP1-201ENST00000400596 1257 ntBASIC12.37□□□□□ -0.43
NDUFA1O15239 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFA1O15239 POU5F1P3-201ENST00000428824 1078 ntBASIC12.37□□□□□ -0.43
NDUFA1O15239 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 AC133681.1-201ENST00000465482 601 ntBASIC12.37□□□□□ -0.43
NDUFA1O15239 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NDUFA1O15239 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms