Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.09■□□□□ 0.49
COPEO14579 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.09■□□□□ 0.49
COPEO14579 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.09■□□□□ 0.49
COPEO14579 KRT18P6-201ENST00000555540 1265 ntBASIC18.09■□□□□ 0.49
COPEO14579 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.09■□□□□ 0.49
COPEO14579 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.09■□□□□ 0.49
COPEO14579 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COPEO14579 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
COPEO14579 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COPEO14579 LINC01126-201ENST00000623515 1646 ntBASIC18.09■□□□□ 0.49
COPEO14579 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPEO14579 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
COPEO14579 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPEO14579 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPEO14579 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPEO14579 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COPEO14579 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPEO14579 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COPEO14579 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COPEO14579 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
COPEO14579 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.08■□□□□ 0.48
COPEO14579 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPEO14579 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.08■□□□□ 0.48
COPEO14579 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.08■□□□□ 0.48
COPEO14579 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPEO14579 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPEO14579 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.08■□□□□ 0.48
COPEO14579 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.08■□□□□ 0.48
COPEO14579 AL355312.1-201ENST00000407115 2176 ntBASIC18.08■□□□□ 0.48
COPEO14579 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPEO14579 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
COPEO14579 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.08■□□□□ 0.48
COPEO14579 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPEO14579 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.07■□□□□ 0.48
COPEO14579 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
COPEO14579 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.07■□□□□ 0.48
COPEO14579 CA15P1-201ENST00000481698 905 ntBASIC18.07■□□□□ 0.48
COPEO14579 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.07■□□□□ 0.48
COPEO14579 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.07■□□□□ 0.48
COPEO14579 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
COPEO14579 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.07■□□□□ 0.48
COPEO14579 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.07■□□□□ 0.48
COPEO14579 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COPEO14579 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPEO14579 HOXB1-202ENST00000577092 1414 ntBASIC18.06■□□□□ 0.48
COPEO14579 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.06■□□□□ 0.48
COPEO14579 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
COPEO14579 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
COPEO14579 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.06■□□□□ 0.48
COPEO14579 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COPEO14579 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 FAM197Y1-201ENST00000421178 764 ntBASIC18.06■□□□□ 0.48
COPEO14579 KRT18P23-201ENST00000435622 1283 ntBASIC18.06■□□□□ 0.48
COPEO14579 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COPEO14579 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.06■□□□□ 0.48
COPEO14579 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.06■□□□□ 0.48
COPEO14579 DGCR10-201ENST00000609839 495 ntBASIC18.06■□□□□ 0.48
COPEO14579 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
COPEO14579 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.06■□□□□ 0.48
COPEO14579 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COPEO14579 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COPEO14579 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms