Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 SLC25A6P5-201ENST00000435663 894 ntBASIC17.18■□□□□ 0.34
LRIT2A6NDA9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 AC011498.5-201ENST00000592027 486 ntBASIC17.18■□□□□ 0.34
LRIT2A6NDA9 AC009154.2-201ENST00000621177 724 ntBASIC17.18■□□□□ 0.34
LRIT2A6NDA9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 AC022898.2-201ENST00000616822 1312 ntBASIC17.18■□□□□ 0.34
LRIT2A6NDA9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.18■□□□□ 0.34
LRIT2A6NDA9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 TSPY12P-201ENST00000421279 868 ntBASIC17.17■□□□□ 0.34
LRIT2A6NDA9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 AL445228.2-201ENST00000605589 952 ntBASIC17.17■□□□□ 0.34
LRIT2A6NDA9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRIT2A6NDA9 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.16■□□□□ 0.34
LRIT2A6NDA9 KRT18P55-202ENST00000578578 1546 ntBASIC17.16■□□□□ 0.34
LRIT2A6NDA9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 AC008764.6-201ENST00000595909 2069 ntBASIC17.16■□□□□ 0.34
LRIT2A6NDA9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 NOC2LP2-201ENST00000407594 1944 ntBASIC17.16■□□□□ 0.34
LRIT2A6NDA9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRIT2A6NDA9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRIT2A6NDA9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms