Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.77■□□□□ 0.12
SHISA3A0PJX4 AC130371.2-201ENST00000619443 611 ntBASIC15.77■□□□□ 0.12
SHISA3A0PJX4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHISA3A0PJX4 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.77■□□□□ 0.11
SHISA3A0PJX4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHISA3A0PJX4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.11
SHISA3A0PJX4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SHISA3A0PJX4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SHISA3A0PJX4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.77■□□□□ 0.11
SHISA3A0PJX4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
SHISA3A0PJX4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.77■□□□□ 0.11
SHISA3A0PJX4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 HLA-L-209ENST00000420110 1011 ntBASIC15.76■□□□□ 0.11
SHISA3A0PJX4 AC011506.1-201ENST00000474329 610 ntBASIC15.76■□□□□ 0.11
SHISA3A0PJX4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 AC132938.6-201ENST00000623828 1655 ntBASIC15.76■□□□□ 0.11
SHISA3A0PJX4 AL024508.2-201ENST00000607749 1894 ntBASIC15.76■□□□□ 0.11
SHISA3A0PJX4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SHISA3A0PJX4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 FAM207BP-201ENST00000447172 505 ntBASIC15.75■□□□□ 0.11
SHISA3A0PJX4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.75■□□□□ 0.11
SHISA3A0PJX4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 FLJ38576-201ENST00000623820 2459 ntBASIC15.75■□□□□ 0.11
SHISA3A0PJX4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SHISA3A0PJX4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 AC239809.2-201ENST00000415381 517 ntBASIC15.74■□□□□ 0.11
SHISA3A0PJX4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.74■□□□□ 0.11
SHISA3A0PJX4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms