Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 RCC2P3-201ENST00000418112 1537 ntBASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KRT18P56-201ENST00000507275 550 ntBASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC069148.1-201ENST00000608741 768 ntBASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC083849.1-201ENST00000615227 514 ntBASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC116407.4-201ENST00000623319 1061 ntBASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC020916.1-201ENST00000587762 1774 ntBASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC093677.2-201ENST00000600169 1863 ntBASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.54□□□□□ -0.08
TCRBV4S1A1TA0A5B7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms