Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 PCDH8P1-201ENST00000428983 2773 ntBASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV3S1A0A5B6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 NCF1B-203ENST00000435988 1254 ntBASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 RARRES2P6-201ENST00000567333 442 ntBASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 AL024508.2-201ENST00000607749 1894 ntBASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRBV3S1A0A5B6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 UNC93B5-201ENST00000530315 699 ntBASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 AC130371.2-201ENST00000619443 611 ntBASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TCRBV3S1A0A5B6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 FAM207BP-201ENST00000447172 505 ntBASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 RPS2P4-201ENST00000476944 856 ntBASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 AC069544.1-201ENST00000609399 999 ntBASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 AL353708.3-201ENST00000610272 989 ntBASIC16.9■□□□□ 0.3
TCRBV3S1A0A5B6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms