Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 LINC00304-203ENST00000565008 1864 ntBASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 LINC01126-201ENST00000623515 1646 ntBASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 AC026271.2-201ENST00000428091 497 ntBASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 TSPY6P-201ENST00000448518 926 ntBASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 PCDHB19P-201ENST00000570871 2371 ntBASIC15.9■□□□□ 0.14
TRDV1A0A1B0GX56 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 AC106886.4-201ENST00000623557 2502 ntBASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 AC105020.1-201ENST00000435356 2205 ntBASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 MTDHP1-201ENST00000605323 784 ntBASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 HLA-J-201ENST00000462773 1622 ntBASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 AGGF1P2-201ENST00000426656 2106 ntBASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRDV1A0A1B0GX56 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 AC046158.3-201ENST00000624947 2558 ntBASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRDV1A0A1B0GX56 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms