Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AC116562.4-202ENST00000641738 218 ntBASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 RBM17P1-201ENST00000453646 1190 ntBASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00959A0A1B0GUT2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 AL024508.2-201ENST00000607749 1894 ntBASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 AC092338.2-201ENST00000568827 1415 ntBASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 Z99916.2-201ENST00000604037 246 ntBASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 SIRPAP1-201ENST00000448467 1770 ntBASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms