Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC124067.4-201ENST00000519691 2379 ntBASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 REXO1L10P-201ENST00000615707 1290 ntBASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 REXO1L12P-201ENST00000622156 912 ntBASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF103-CHMP3A0A140T963 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 AL355355.2-201ENST00000442321 338 ntBASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 KRT18P41-201ENST00000518924 1277 ntBASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC093677.2-201ENST00000600169 1863 ntBASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 AL645608.8-201ENST00000606034 2086 ntBASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF103-CHMP3A0A140T963 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC080080.1-201ENST00000625121 2420 ntBASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 MIR564-202ENST00000385049 94 ntBASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 CRYGFP-201ENST00000418459 633 ntBASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms