Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 KRT18P2-201ENST00000447938 1258 ntBASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 AL596442.2-201ENST00000610240 980 ntBASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC163A0A0D9SF12 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 CRYGEP-201ENST00000412192 528 ntBASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 MIR4469-201ENST00000583919 79 ntBASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 KRT8P47-201ENST00000604727 1398 ntBASIC17.79■□□□□ 0.44
CCDC163A0A0D9SF12 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 PRSS29P-201ENST00000440800 595 ntBASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 AC004706.3-202ENST00000621574 984 ntBASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC163A0A0D9SF12 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms