Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 LINC00602-201ENST00000629776 2065 ntBASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC073592.3-201ENST00000625118 1834 ntBASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 VENTXP7-201ENST00000475503 772 ntBASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC012313.10-201ENST00000623509 926 ntBASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IGHV4-28A0A0C4DH34 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 DUSP5P1-201ENST00000441325 1139 ntBASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC104819.1-201ENST00000504587 486 ntBASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 ESPNP-201ENST00000270691 2015 ntBASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
IGHV4-28A0A0C4DH34 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.03□□□□□ -0.32
IGHV4-28A0A0C4DH34 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms