Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PTCH2Q9Y6C5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PTCH2Q9Y6C5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCH2Q9Y6C5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCH2Q9Y6C5 SDHAP2-201ENST00000455183 2001 ntBASIC20.34■□□□□ 0.85
PTCH2Q9Y6C5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCH2Q9Y6C5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTCH2Q9Y6C5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 KRT18P65-201ENST00000439811 1286 ntBASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 AC138761.1-201ENST00000584393 385 ntBASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 AC073592.4-201ENST00000623827 446 ntBASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCH2Q9Y6C5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTCH2Q9Y6C5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
PTCH2Q9Y6C5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.33■□□□□ 0.84
PTCH2Q9Y6C5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTCH2Q9Y6C5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTCH2Q9Y6C5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 VN2R19P-201ENST00000442399 1052 ntBASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 HCG4B-203ENST00000450128 991 ntBASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 AC112698.1-201ENST00000510299 916 ntBASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 PMPCAP1-201ENST00000508114 1576 ntBASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 AC141586.3-201ENST00000562166 1838 ntBASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.32■□□□□ 0.84
PTCH2Q9Y6C5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 PRSS29P-201ENST00000440800 595 ntBASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 AC108073.2-201ENST00000464002 357 ntBASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 AL158211.5-201ENST00000623583 2518 ntBASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCH2Q9Y6C5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 ELK2BP-201ENST00000415014 1224 ntBASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTCH2Q9Y6C5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms