Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 AC073592.5-201ENST00000624854 528 ntBASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC27.16■■□□□ 1.94
CDC42BPBQ9Y5S2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 AC004706.3-202ENST00000621574 984 ntBASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 AC005593.1-201ENST00000624894 515 ntBASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDC42BPBQ9Y5S2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPBQ9Y5S2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPBQ9Y5S2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CDC42BPBQ9Y5S2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC27.14■■□□□ 1.94
CDC42BPBQ9Y5S2 CYMP-203ENST00000474680 1263 ntBASIC27.14■■□□□ 1.94
CDC42BPBQ9Y5S2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
CDC42BPBQ9Y5S2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC27.14■■□□□ 1.94
CDC42BPBQ9Y5S2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDC42BPBQ9Y5S2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDC42BPBQ9Y5S2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDC42BPBQ9Y5S2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CDC42BPBQ9Y5S2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CDC42BPBQ9Y5S2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC27.14■■□□□ 1.93
CDC42BPBQ9Y5S2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.93
CDC42BPBQ9Y5S2 TBC1D3P5-201ENST00000579401 1545 ntBASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 IGLL3P-201ENST00000412472 434 ntBASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 AL589182.2-201ENST00000619332 1049 ntBASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 CRYGEP-201ENST00000412192 528 ntBASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 AL596442.2-201ENST00000610240 980 ntBASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 AC132938.5-201ENST00000624980 1813 ntBASIC27.13■■□□□ 1.93
CDC42BPBQ9Y5S2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 AC008667.4-201ENST00000607370 168 ntBASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 AL078644.1-201ENST00000609881 752 ntBASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC27.12■■□□□ 1.93
CDC42BPBQ9Y5S2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 ATP6V0CP3-201ENST00000417255 467 ntBASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 AC010507.1-201ENST00000633895 436 ntBASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDC42BPBQ9Y5S2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 AC019129.2-201ENST00000609837 1235 ntBASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 AC010654.1-201ENST00000615722 808 ntBASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 MKNK2P1-201ENST00000437526 628 ntBASIC27.1■■□□□ 1.93
CDC42BPBQ9Y5S2 MIR4751-201ENST00000578027 74 ntBASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms