Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 KRT8P8-201ENST00000434750 1448 ntBASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 AC005052.1-201ENST00000625181 2492 ntBASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAPPC1Q9Y5R8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 AC026691.1-201ENST00000602502 2017 ntBASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 KRT8P45-201ENST00000414328 1447 ntBASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAPPC1Q9Y5R8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 MIR600HG-201ENST00000449175 5984 ntBASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAPPC1Q9Y5R8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms