Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB3Q9Y5E6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB3Q9Y5E6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB3Q9Y5E6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB3Q9Y5E6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 HOXB1-202ENST00000577092 1414 ntBASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 CLEC4GP1-201ENST00000596555 870 ntBASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 AC008556.1-201ENST00000610908 2040 ntBASIC17.74■□□□□ 0.43
PCDHB3Q9Y5E6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB3Q9Y5E6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 AC026396.1-201ENST00000419388 421 ntBASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 SPDYE13P-201ENST00000445314 798 ntBASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 MIR3917-201ENST00000580971 93 ntBASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 MTMR9LP-203ENST00000426597 1545 ntBASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB3Q9Y5E6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB3Q9Y5E6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms