Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 AL049840.3-201ENST00000602669 611 ntBASIC18.83■□□□□ 0.6
YIPF1Q9Y548 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.83■□□□□ 0.6
YIPF1Q9Y548 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
YIPF1Q9Y548 AC243591.1-201ENST00000452967 1364 ntBASIC18.82■□□□□ 0.6
YIPF1Q9Y548 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 FAM220CP-201ENST00000395253 831 ntBASIC18.82■□□□□ 0.6
YIPF1Q9Y548 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 AC007967.3-201ENST00000434308 558 ntBASIC18.82■□□□□ 0.6
YIPF1Q9Y548 AC093909.1-201ENST00000504731 1122 ntBASIC18.82■□□□□ 0.6
YIPF1Q9Y548 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 SLC25A1P1-201ENST00000528351 927 ntBASIC18.82■□□□□ 0.6
YIPF1Q9Y548 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 SART3-203ENST00000546611 1184 ntBASIC18.82■□□□□ 0.6
YIPF1Q9Y548 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 FAM215A-202ENST00000632077 792 ntBASIC18.82■□□□□ 0.6
YIPF1Q9Y548 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.82■□□□□ 0.6
YIPF1Q9Y548 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 HNRNPDP1-201ENST00000439535 754 ntBASIC18.81■□□□□ 0.6
YIPF1Q9Y548 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 AL671883.3-201ENST00000603274 991 ntBASIC18.81■□□□□ 0.6
YIPF1Q9Y548 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
YIPF1Q9Y548 KRT8P47-201ENST00000604727 1398 ntBASIC18.81■□□□□ 0.6
YIPF1Q9Y548 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 AC021087.4-201ENST00000563761 564 ntBASIC18.8■□□□□ 0.6
YIPF1Q9Y548 AF228730.7-201ENST00000641842 219 ntBASIC18.8■□□□□ 0.6
YIPF1Q9Y548 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.8■□□□□ 0.6
YIPF1Q9Y548 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms