Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 PP12613-201ENST00000424958 2230 ntBASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 KRT19P1-201ENST00000405746 1186 ntBASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 TSPY21P-201ENST00000433481 731 ntBASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 AC007322.4-201ENST00000509611 723 ntBASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 CYP2T3P-201ENST00000601990 817 ntBASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 AL136967.2-201ENST00000623968 743 ntBASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CHTOPQ9Y3Y2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 AL121761.2-201ENST00000598007 1648 ntBASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 AC096631.2-201ENST00000436136 790 ntBASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 AL589743.5-201ENST00000616611 1050 ntBASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 AC013268.1-206ENST00000638368 961 ntBASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 AC112229.1-201ENST00000639295 961 ntBASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CHTOPQ9Y3Y2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms