Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 PKD1P1-201ENST00000458669 6805 ntBASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 AL162741.1-201ENST00000565563 1558 ntBASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RPH3AQ9Y2J0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.59■□□□□ 0.25
RPH3AQ9Y2J0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPH3AQ9Y2J0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.58■□□□□ 0.25
RPH3AQ9Y2J0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPH3AQ9Y2J0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RPH3AQ9Y2J0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.58■□□□□ 0.25
RPH3AQ9Y2J0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RPH3AQ9Y2J0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPH3AQ9Y2J0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms