Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDZRN3Q9UPQ7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 AP003733.1-201ENST00000491725 852 ntBASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 AC074051.2-201ENST00000565115 352 ntBASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 AC010240.3-201ENST00000607688 395 ntBASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 AL109659.2-201ENST00000606809 1674 ntBASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 NOC2LP2-201ENST00000407594 1944 ntBASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDZRN3Q9UPQ7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 KRT16P4-201ENST00000453883 522 ntBASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 MIR3180-4-201ENST00000582223 153 ntBASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 AC068880.1-201ENST00000507289 2297 ntBASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDZRN3Q9UPQ7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 KRT18P23-201ENST00000435622 1283 ntBASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 AC079776.4-201ENST00000511039 504 ntBASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 HLA-A-201ENST00000376802 1334 ntBASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDZRN3Q9UPQ7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 MRPL3P1-201ENST00000400109 1033 ntBASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 RCC2P3-201ENST00000418112 1537 ntBASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC23.28■■□□□ 1.32
PDZRN3Q9UPQ7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDZRN3Q9UPQ7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDZRN3Q9UPQ7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDZRN3Q9UPQ7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms