Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA4Q9UN74 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 AC022898.2-201ENST00000616822 1312 ntBASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDHA4Q9UN74 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PCDHA4Q9UN74 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHA4Q9UN74 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHA4Q9UN74 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHA4Q9UN74 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHA4Q9UN74 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHA4Q9UN74 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHA4Q9UN74 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHA4Q9UN74 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 AC016734.2-201ENST00000624325 1377 ntBASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 BX276092.5-203ENST00000456199 560 ntBASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 AC068472.1-201ENST00000474589 881 ntBASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 AL121672.3-201ENST00000608644 468 ntBASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 AC091076.1-201ENST00000610741 619 ntBASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA4Q9UN74 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 RN7SL606P-201ENST00000472779 293 ntBASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHA4Q9UN74 GUSBP12-201ENST00000513727 720 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms