Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.75■□□□□ 0.91
USP25Q9UHP3 RBM17P1-201ENST00000453646 1190 ntBASIC20.75■□□□□ 0.91
USP25Q9UHP3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.75■□□□□ 0.91
USP25Q9UHP3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.75■□□□□ 0.91
USP25Q9UHP3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP25Q9UHP3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
USP25Q9UHP3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP25Q9UHP3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP25Q9UHP3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.75■□□□□ 0.91
USP25Q9UHP3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 FLJ13224-201ENST00000313737 1514 ntBASIC20.74■□□□□ 0.91
USP25Q9UHP3 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.74■□□□□ 0.91
USP25Q9UHP3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 GMCL1P1-201ENST00000463439 1581 ntBASIC20.74■□□□□ 0.91
USP25Q9UHP3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 AC008550.1-201ENST00000511500 884 ntBASIC20.74■□□□□ 0.91
USP25Q9UHP3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 WWOX-216ENST00000569818 525 ntBASIC20.74■□□□□ 0.91
USP25Q9UHP3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 MIR4785-201ENST00000585005 73 ntBASIC20.74■□□□□ 0.91
USP25Q9UHP3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.74■□□□□ 0.91
USP25Q9UHP3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP25Q9UHP3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
USP25Q9UHP3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 AL163051.1-201ENST00000569214 1512 ntBASIC20.73■□□□□ 0.91
USP25Q9UHP3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP25Q9UHP3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 CCR12P-201ENST00000446203 998 ntBASIC20.72■□□□□ 0.91
USP25Q9UHP3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 AP003041.3-201ENST00000527151 707 ntBASIC20.72■□□□□ 0.91
USP25Q9UHP3 FITM1-202ENST00000559294 800 ntBASIC20.72■□□□□ 0.91
USP25Q9UHP3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP25Q9UHP3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP25Q9UHP3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms