Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 AC087499.1-201ENST00000418141 1075 ntBASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 CA15P1-201ENST00000481698 905 ntBASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 AC009102.3-201ENST00000623118 1491 ntBASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 KRT8P9-201ENST00000558927 1449 ntBASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
VTI1BQ9UEU0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 AC093010.1-201ENST00000473625 1624 ntBASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 MIR149-201ENST00000384879 89 ntBASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 C2orf69P3-201ENST00000565542 1120 ntBASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 AL163051.1-201ENST00000569214 1512 ntBASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 SDHAP2-201ENST00000455183 2001 ntBASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 AC108860.2-201ENST00000562760 2183 ntBASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.8■□□□□ 0.44
VTI1BQ9UEU0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 NAPSB-206ENST00000562112 1266 ntBASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 CYP2D8P-201ENST00000433633 1490 ntBASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 AC009053.2-201ENST00000563701 2365 ntBASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTI1BQ9UEU0 PKD1P1-201ENST00000458669 6805 ntBASIC17.78■□□□□ 0.44
VTI1BQ9UEU0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTI1BQ9UEU0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms