Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 AC132938.6-201ENST00000623828 1655 ntBASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 AC093010.1-201ENST00000473625 1624 ntBASIC16.05■□□□□ 0.16
CLCF1Q9UBD9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 AC120498.9-201ENST00000339021 3867 ntBASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 AL138831.2-201ENST00000606564 490 ntBASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCF1Q9UBD9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 AKR1C7P-201ENST00000305623 895 ntBASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 AC112698.1-201ENST00000510299 916 ntBASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 AL031008.1-201ENST00000619963 541 ntBASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 AC098818.2-201ENST00000564925 2320 ntBASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCF1Q9UBD9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms