Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
BLOC1S4Q9NUP1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 AC012317.2-201ENST00000623305 2251 ntBASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 AL121956.5-201ENST00000625261 221 ntBASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.1■□□□□ 0.81
BLOC1S4Q9NUP1 KRT8P47-201ENST00000604727 1398 ntBASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 AC009154.2-201ENST00000621177 724 ntBASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BLOC1S4Q9NUP1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 AC005332.1-201ENST00000577698 1310 ntBASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 TSPY12P-201ENST00000421279 868 ntBASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 AL590326.2-201ENST00000625139 305 ntBASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.08■□□□□ 0.81
BLOC1S4Q9NUP1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
BLOC1S4Q9NUP1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 AC020763.4-201ENST00000623414 4170 ntBASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BLOC1S4Q9NUP1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms