Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 AL671277.2-201ENST00000458060 996 ntBASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 DUTP2-201ENST00000519164 463 ntBASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 LINC00602-201ENST00000629776 2065 ntBASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN4Q9NRR5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
UBQLN4Q9NRR5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
UBQLN4Q9NRR5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBQLN4Q9NRR5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 SLC25A6P5-201ENST00000435663 894 ntBASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 AP003733.1-201ENST00000491725 852 ntBASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
UBQLN4Q9NRR5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 AP000997.3-201ENST00000623333 2250 ntBASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 LINC00167-201ENST00000530583 1419 ntBASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 AC132938.6-201ENST00000623828 1655 ntBASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.63■□□□□ 0.25
UBQLN4Q9NRR5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms