Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 RPS2P55-201ENST00000397318 883 ntBASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 AC107956.1-201ENST00000494359 873 ntBASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 MIR3180-4-201ENST00000582223 153 ntBASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 AC093010.1-201ENST00000473625 1624 ntBASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.63■□□□□ 0.25
KRCC1Q9NPI7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 KRT18P55-202ENST00000578578 1546 ntBASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 CCR12P-201ENST00000446203 998 ntBASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 AC142381.4-202ENST00000563973 229 ntBASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRCC1Q9NPI7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 WWOX-216ENST00000569818 525 ntBASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 AC008687.5-201ENST00000593746 558 ntBASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 REXO1L10P-201ENST00000615707 1290 ntBASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 REXO1L12P-201ENST00000622156 912 ntBASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRCC1Q9NPI7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms