Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 TSPY21P-201ENST00000433481 731 ntBASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 AL499627.1-201ENST00000569373 2188 ntBASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VCX3AQ9NNX9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 TERF1P2-201ENST00000583350 1212 ntBASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VCX3AQ9NNX9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 AC091305.1-201ENST00000479476 895 ntBASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 AC016405.3-201ENST00000607710 860 ntBASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3AQ9NNX9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 LINC02228-203ENST00000641970 1355 ntBASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3AQ9NNX9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms