Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.31■□□□□ 0.36
PIF1Q9H611 AL023284.2-201ENST00000405850 579 ntBASIC17.31■□□□□ 0.36
PIF1Q9H611 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.31■□□□□ 0.36
PIF1Q9H611 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.31■□□□□ 0.36
PIF1Q9H611 GPAT2P1-201ENST00000444924 1672 ntBASIC17.31■□□□□ 0.36
PIF1Q9H611 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.31■□□□□ 0.36
PIF1Q9H611 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PIF1Q9H611 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PIF1Q9H611 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 KRT8P50-201ENST00000562022 1438 ntBASIC17.3■□□□□ 0.36
PIF1Q9H611 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.3■□□□□ 0.36
PIF1Q9H611 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.3■□□□□ 0.36
PIF1Q9H611 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PIF1Q9H611 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.3■□□□□ 0.36
PIF1Q9H611 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.3■□□□□ 0.36
PIF1Q9H611 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.3■□□□□ 0.36
PIF1Q9H611 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 AP001412.1-201ENST00000608405 714 ntBASIC17.3■□□□□ 0.36
PIF1Q9H611 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PIF1Q9H611 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PIF1Q9H611 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PIF1Q9H611 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PIF1Q9H611 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.3■□□□□ 0.36
PIF1Q9H611 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.29■□□□□ 0.36
PIF1Q9H611 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PIF1Q9H611 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PIF1Q9H611 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.29■□□□□ 0.36
PIF1Q9H611 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.29■□□□□ 0.36
PIF1Q9H611 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PIF1Q9H611 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.29■□□□□ 0.36
PIF1Q9H611 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.29■□□□□ 0.36
PIF1Q9H611 MCCD1P1-208ENST00000445732 328 ntBASIC17.29■□□□□ 0.36
PIF1Q9H611 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.29■□□□□ 0.36
PIF1Q9H611 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.29■□□□□ 0.36
PIF1Q9H611 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.29■□□□□ 0.36
PIF1Q9H611 MIR6786-201ENST00000616843 113 ntBASIC17.29■□□□□ 0.36
PIF1Q9H611 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PIF1Q9H611 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PIF1Q9H611 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms