Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 MIR1199-201ENST00000621445 119 ntBASIC19.71■□□□□ 0.75
HIPK3Q9H422 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 AL161938.1-201ENST00000569833 2180 ntBASIC19.71■□□□□ 0.75
HIPK3Q9H422 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 AC093484.2-201ENST00000580996 2166 ntBASIC19.7■□□□□ 0.74
HIPK3Q9H422 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK3Q9H422 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.7■□□□□ 0.74
HIPK3Q9H422 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK3Q9H422 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK3Q9H422 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK3Q9H422 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK3Q9H422 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK3Q9H422 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 AC064836.3-201ENST00000607928 673 ntBASIC19.69■□□□□ 0.74
HIPK3Q9H422 AC005593.1-201ENST00000624894 515 ntBASIC19.69■□□□□ 0.74
HIPK3Q9H422 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 AL022326.1-202ENST00000641533 845 ntBASIC19.69■□□□□ 0.74
HIPK3Q9H422 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
HIPK3Q9H422 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK3Q9H422 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK3Q9H422 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK3Q9H422 AL020996.1-203ENST00000536896 2307 ntBASIC19.69■□□□□ 0.74
HIPK3Q9H422 AC079776.2-201ENST00000641154 1609 ntBASIC19.69■□□□□ 0.74
HIPK3Q9H422 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK3Q9H422 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK3Q9H422 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK3Q9H422 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK3Q9H422 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK3Q9H422 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK3Q9H422 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 AP006288.1-201ENST00000446065 395 ntBASIC19.68■□□□□ 0.74
HIPK3Q9H422 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.68■□□□□ 0.74
HIPK3Q9H422 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
HIPK3Q9H422 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK3Q9H422 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 AL049812.1-201ENST00000432563 2267 ntBASIC19.67■□□□□ 0.74
HIPK3Q9H422 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK3Q9H422 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK3Q9H422 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HIPK3Q9H422 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms