Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCX3BQ9H321 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.26■□□□□ 0.35
VCX3BQ9H321 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VCX3BQ9H321 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 KRT8P32-201ENST00000512863 1461 ntBASIC17.25■□□□□ 0.35
VCX3BQ9H321 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.25■□□□□ 0.35
VCX3BQ9H321 TUBB8P6-201ENST00000436895 1288 ntBASIC17.25■□□□□ 0.35
VCX3BQ9H321 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 AC106739.1-201ENST00000617035 715 ntBASIC17.25■□□□□ 0.35
VCX3BQ9H321 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VCX3BQ9H321 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3BQ9H321 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 KRT18P16-201ENST00000510337 1294 ntBASIC17.24■□□□□ 0.35
VCX3BQ9H321 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 AC092850.2-201ENST00000623821 2697 ntBASIC17.24■□□□□ 0.35
VCX3BQ9H321 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 TSPY26P-202ENST00000565928 3884 ntBASIC17.24■□□□□ 0.35
VCX3BQ9H321 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3BQ9H321 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
VCX3BQ9H321 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 AC126755.1-201ENST00000525846 6405 ntBASIC17.23■□□□□ 0.35
VCX3BQ9H321 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 PCDHA14-201ENST00000506751 2298 ntBASIC17.23■□□□□ 0.35
VCX3BQ9H321 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms