Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 CICP8-201ENST00000455800 2813 ntBASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CYSTM1Q9H1C7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 AC027601.5-201ENST00000624065 2482 ntBASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CYSTM1Q9H1C7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 AC022532.1-201ENST00000624563 1728 ntBASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 KRT8P36-201ENST00000489121 1440 ntBASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CYSTM1Q9H1C7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms