Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC116562.4-201ENST00000641316 2276 ntBASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH11XQ9BZA7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 PRYP5-201ENST00000451909 266 ntBASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH11XQ9BZA7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 AC108751.1-201ENST00000490852 363 ntBASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 AC136632.2-201ENST00000512891 861 ntBASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 AC134684.3-201ENST00000641758 218 ntBASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 AC079781.4-201ENST00000641908 219 ntBASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 AC004817.3-201ENST00000602957 2129 ntBASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH11XQ9BZA7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH11XQ9BZA7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 AC023274.1-201ENST00000418278 595 ntBASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 RPS8P6-201ENST00000426177 609 ntBASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 HMGN1P19-201ENST00000436976 333 ntBASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDH11XQ9BZA7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC23.32■■□□□ 1.32
PCDH11XQ9BZA7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms